BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A10LP1|AL425969
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1339 807 0.0
3x_Contig1334 281 1e-75
>3x_Contig1339
Length = 6194
Score = 807 bits (407), Expect = 0.0
Identities = 414/415 (99%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 1 atcttgaactatttatatatggaaaagttaaaacttttgaaacttcaatagttacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atcttgaactatttatatatggaaaagttaaaacttttgaaacttcaatagttacagaac 355
Query: 61 ggctgttgagacagccagccagtttctacgaaatttcatctgccattttgatatttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggctgttgagacagccagccagtttctacgaaatttcatctgccattttgatatttgaag 295
Query: 121 ccaagtttgagattgtaattcacgaacaccgaagccgttctttttcgcatcgtaaatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ccaagtttgagattgtaattcacgaacaccgaagccgttctttttcgcatcgtaaatact 235
Query: 181 cattgtttttttttctgacaccaggaccctatatcaagcagatcaaaatgatgaaatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cattgtttttttttctgacaccaggaccctatatcaagcagatcaaaatgatgaaatggc 175
Query: 241 ttggagccttggaacacttagagtaaccagccatccatacttcaggctattgataccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ttggagccttggaacacttagagtaaccagccatccatacttcaggctattgataccttt 115
Query: 301 cttgactgttttacttcagtgctatggtgtatgggcattctgccaccaattttgttatct 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 114 cttgactgttttacttcagtgctatggtgtat-ggcattctgccaccaattttgttatct 56
Query: 361 gcaactatatcaaagacgaaatgctaagggcgcatgcatcgggcttatcattgtg 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gcaactatatcaaagacgaaatgctaagggcgcatgcatcgggcttatcattgtg 1
>3x_Contig1334
Length = 7302
Score = 281 bits (142), Expect = 1e-75
Identities = 142/142 (100%)
Strand = Plus / Plus
Query: 654 tcatcactctactaaagtcggatattgtgttccaagatttgaccattactgtgtttggat 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatcactctactaaagtcggatattgtgttccaagatttgaccattactgtgtttggat 60
Query: 714 tggtactgtccttggtagactcaattataaactattcgtacagttcacattttaccttga 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtactgtccttggtagactcaattataaactattcgtacagttcacattttaccttga 120
Query: 774 cctcgttgttctaatactaatg 795
||||||||||||||||||||||
Sbjct: 121 cctcgttgttctaatactaatg 142
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6537
Number of Sequences: 1807
Number of extensions: 6537
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)